preprocess

Preprocess

• Video preprocessor
  • BaseVideoProcessor
    • BaseVideoProcessor.append_output_frame()
    • BaseVideoProcessor.batch_export_videos()
    • BaseVideoProcessor.export_output_video()
    • BaseVideoProcessor.output_named_video
    • BaseVideoProcessor.process_frame()
  • ButterworthProcessor
    • ButterworthProcessor.apply_filter()
    • ButterworthProcessor.apply_filter_to_frames()
    • ButterworthProcessor.batch_export_videos()
    • ButterworthProcessor.butter_lowpass_filter()
    • ButterworthProcessor.plot_filtered_data()
    • ButterworthProcessor.process_frame()
  • FreqencyMaskProcessor
    • FreqencyMaskProcessor.batch_export_videos()
    • FreqencyMaskProcessor.export_freq_domain_frames()
    • FreqencyMaskProcessor.export_freq_mask()
    • FreqencyMaskProcessor.freq_domain_named_video
    • FreqencyMaskProcessor.freq_mask
    • FreqencyMaskProcessor.freq_mask_named_frame
    • FreqencyMaskProcessor.process_frame()
  • MinProjSubtractProcessor
    • MinProjSubtractProcessor.batch_export_videos()
    • MinProjSubtractProcessor.export_minimum_projection()
    • MinProjSubtractProcessor.min_proj_named_frame
    • MinProjSubtractProcessor.normalize_stack()
  • NoisePatchProcessor
    • NoisePatchProcessor.batch_export_videos()
    • NoisePatchProcessor.diff_frames_named_video
    • NoisePatchProcessor.export_diff_frames()
    • NoisePatchProcessor.export_noise_patch()
    • NoisePatchProcessor.export_noisy_video()
    • NoisePatchProcessor.noise_patch_named_video
    • NoisePatchProcessor.noisy_frames_named_video
    • NoisePatchProcessor.process_frame()
  • PassThroughProcessor
    • PassThroughProcessor.batch_export_videos()
    • PassThroughProcessor.pass_through_named_video
    • PassThroughProcessor.process_frame()
  • denoise_run()
  • log_processing_metadata()
• Frame helpers
  • BaseSingleFrameHelper
    • BaseSingleFrameHelper.find_invalid_area()
    • BaseSingleFrameHelper.process_frame()
  • BlackAreaDetector
    • BlackAreaDetector._detect_black_pixels()
    • BlackAreaDetector.find_invalid_area()
  • FrameSplitter
    • FrameSplitter.get_buffer_shape()
  • FrequencyMaskHelper
    • FrequencyMaskHelper._gen_freq_mask()
    • FrequencyMaskHelper.freq_domain()
    • FrequencyMaskHelper.freq_mask
    • FrequencyMaskHelper.process_frame()
  • GradientNoiseDetector
    • GradientNoiseDetector._detect_with_gradient()
    • GradientNoiseDetector.find_invalid_area()
  • InvalidFrameDetector
    • InvalidFrameDetector.find_invalid_area()
  • MSENoiseDetector
    • MSENoiseDetector._detect_with_mean_error()
    • MSENoiseDetector.find_invalid_area()
    • MSENoiseDetector.register_previous_frame()
  • mean_intensity()
• z-stack helpers
  • ZStackHelper
    • ZStackHelper.get_minimum_projection()
    • ZStackHelper.normalize_video_stack()